Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record CP000113.1:
Cluster 1Transatpks-nrps-t2pks182756

Cluster 1 - Transatpks-nrps-t2pks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(pk-mal) + (gly)
NRPSPredictor2 SVM: gly
Stachelhaus code: gly
Minowa: gly
consensus: gly

PKS signature: N/A
Minowa: mmal
consensus: pk

PKS signature: mal
Minowa: mal
consensus: mal

Database cross-links

Gene cluster description

Gene Cluster 1. Type = transatpks-nrps-t2pks. Location: 1 - 82756 nt. Click on genes for more information.
Show pHMM detection rules used
transatpks: ((PKS_KS & ATd) or (ene_KS & ATd) or (mod_KS & ATd) or (hyb_KS & ATd) or (itr_KS & ATd) or (tra_KS & ATd))
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
t2pks: (t2ks or t2clf or t2pks2)


biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters