Identified secondary metabolite clusters

Cluster Type From To
The following clusters are from record AJ586576.1:
Cluster 1Nrps-transatpks155839

Cluster 1 - Nrps-transatpks

Predicted core structure

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Prediction details

Monomers prediction:
(nrp-nrp) + (nrp) + (pk-nrp-nrp-nrp) + (asn)
albIX
NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: N/A
Minowa: ser
consensus: nrp

NRPSPredictor2 SVM: gly,ala,val,leu,ile,abu,iva
Stachelhaus code: N/A
Minowa: ser
consensus: nrp

albVII
NRPSPredictor2 SVM: hydrophobic-aliphatic
Stachelhaus code: N/A
Minowa: lys
consensus: nrp

albI
Minowa: Acetyl-CoA

NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: N/A
Minowa: ser
consensus: nrp

NRPSPredictor2 SVM: ser
Stachelhaus code: N/A
Minowa: glu
consensus: nrp

NRPSPredictor2 SVM: hydrophilic
Stachelhaus code: N/A
Minowa: ser
consensus: nrp

albIV
NRPSPredictor2 SVM: asn
Stachelhaus code: asn
Minowa: asn
consensus: asn

Database cross-links

Gene cluster description

Gene Cluster 1. Type = nrps-transatpks. Location: 1 - 55839 nt. Click on genes for more information.
Show pHMM detection rules used
nrps: ((Condensation & AMP-binding) or (Condensation & A-OX) or cluster(Condensation,AMP-binding))
transatpks: ((PKS_KS & ATd) or (ene_KS & ATd) or (mod_KS & ATd) or (hyb_KS & ATd) or (itr_KS & ATd) or (tra_KS & ATd))

Legend:

biosynthetic genes
transport-related genes
regulatory genes
other genes

Detailed annotation

Homologous gene clusters